WaDI
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  • Getting started
    • Installation
    • Requirements
    • WaDI workflow and concepts
    • Minimal working example
  • User guide
    • Example 1: Import stacked data
      • Step 1: Initialize the DataObject class
      • Step 2: Read the data
      • Step 3: Map the names
      • Step 4: Harmonize the data
    • Example 2: Using blocks to import messy data
      • Step 1: Initialize the WaDI DataObject class
      • Step 2: Read the data
      • Step 3: Map the names and units
      • Step 4: Harmonize the data
    • Creating mapping dictionaries
      • Using the default dictionary
      • Querying PubChem for CIDs
      • Querying PubChem for CAS numbers
      • Creating a translation dictionary
    • Creating HGC compatible DataFrames
  • Developer guide
  • API reference
    • Submodules
      • wadi.api_utils module
        • translate_strings()
        • get_pubchem_json()
        • query_pubchem_fuzzy()
        • query_pubchem_synonyms()
        • query_pubchem_cas()
        • get_pubchem_molecular_weight()
        • get_pubchem_properties()
      • wadi.base module
        • WadiBaseClass
      • wadi.dataobject module
        • DataObject
      • wadi.filereader module
        • FileReader
      • wadi.harmonizer module
        • Harmonizer
      • wadi.infotable module
        • InfoTable
      • wadi.mapper module
        • MapperDict
        • Mapper
      • wadi.unitconverter module
        • dict2str()
        • UnitRegexMapper
        • UnitConverter
      • wadi.utils module
        • check_arg()
        • check_arg_list()
        • check_if_nested_list()
        • parse_name_and_units()
        • StringList
        • valid_kwargs()
        • fuzzy_min_score()
        • _wadi_style_warning()
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© Copyright 2022, Vincent Post, Martin van der Schans, Martin Korevaar. Revision a0e25457.

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